dp

Class Dice

java.lang.Object

dp.Dice

public class Dice
extends Object

This demo file is a simulation of the "The occasionally dishonest casino" example from the book by R. Durbin, S. Eddy, A. Krogh, G. Mitchison, "Biological Sequence Analysis", Chapter 3 Markov Chains and hidden Markov models, Section 2, pp55-57.

Use: Dice

The output consists of three lines: line 1 represents the output sequence generated by the hidden markov model (f for fair and l for loaded). Line 2 contains the name of the die which emitted the corresponding output symbol. Line 3 shows the state sequence predicted by the Viterbi algorithm.

Author:

Samiul Hasan

Constructor Summary

Constructors

Constructor and Description
Dice()

Method Summary

Methods

Modifier and Type	Method and Description
static org.biojava.bio.dp.MarkovModel	createCasino()
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Dice

public Dice()

Method Detail

main

public static void main(String[] args)

createCasino

public static org.biojava.bio.dp.MarkovModel createCasino()