eventbasedparsing

Class Blast2HTML

java.lang.Object

eventbasedparsing.Blast2HTML

public class Blast2HTML
extends Object

Example application for converting a Blast - like SAX stream to HTML. Primary author Colin Hardman (CAT) Other authors - Tim Dilks (CAT) Simon Brocklehurst (CAT) Stuart Johnston (CAT) Lawerence Bower (CAT) Derek Crockford (CAT) Neil Benn (CAT) Copyright 2001 Cambridge Antibody Technology Group plc. This code released to the biojava project, May 2001 under the LGPL license.

Version:

1.0

Author:

Cambridge Antibody Technology Group plc

Constructor Summary

Constructors

Constructor and Description
Blast2HTML()

Method Summary

Methods

Modifier and Type	Method and Description
static org.biojava.bio.program.blast2html.HTMLRenderer	configureBlastN(PrintWriter poOut)
static org.biojava.bio.program.blast2html.HTMLRenderer	configureBlastP(PrintWriter poOut)
static org.biojava.bio.program.blast2html.HTMLRenderer	configureRenderer(String poType, PrintWriter poOut)
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Blast2HTML

public Blast2HTML()

Method Detail

configureRenderer

public static org.biojava.bio.program.blast2html.HTMLRenderer configureRenderer(String poType,
                                                                PrintWriter poOut)

configureBlastN

public static org.biojava.bio.program.blast2html.HTMLRenderer configureBlastN(PrintWriter poOut)

configureBlastP

public static org.biojava.bio.program.blast2html.HTMLRenderer configureBlastP(PrintWriter poOut)

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception