gff

Class EmblToGffFasta

java.lang.Object

gff.EmblToGffFasta

public class EmblToGffFasta
extends Object

Converts an EMBL file into a fasta file for the sequence and a GFF file for the features.

This program demonstrates how to read in an EMBL file, how to write a fasta file and how to write GFF.

Use:
java EmblToGffFasta emblFile fastaOut gffOut

Author:

Matthew Pocock

Constructor Summary

Constructors

Constructor and Description
EmblToGffFasta()

Method Summary

Methods

Modifier and Type	Method and Description
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EmblToGffFasta

public EmblToGffFasta()

Method Detail

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception