Pdb2XML (BioJava Demos API)

Deprecated.
Prior to the biojava1.1 release - use equivalent class in the demo package eventbasedparsing. Classes in this package were deprecated because nativeapps is an unhelpful name.
```
public class Pdb2XML
extends Object
```
Blast2XML is an application for the conversion native output from BLAST-like bioinformatics software into an XML format. For currently supported bioinformatics programs, please see the documentation for the BlastLikeSaxParser.
The XML produced should validate against the biojava BlastLikeDataSetCollection DTD. Usage is:
```
 java Blast2XML <blastlike pathname> [-mode <strict|lazy>]
 
```
-mode is optional paramater. Choosing strict mode will mean the application throws exceptions if the precise version of a given piece of bioinformatics software is not recognised. Lazy mode will attempt to parse the file regardless of version number.
For programs currently supported, please see the documentation for the BlastLikeSAXParser.
Copyright © 2000 Cambridge Antibody Technology.
Primary author -
- Simon Brocklehurst (CAT)
Other authors -
- Tim Dilks (CAT)
- Colin Hardman (CAT)
- Stuart Johnston (CAT)
Version:

1.0

Author:

Cambridge Antibody Technology Group plc (CAT)

Constructors
Constructor and Description
`Pdb2XML()` Deprecated.

Methods
Modifier and Type	Method and Description
`static void`	`main(String[] args)` Deprecated. Converts an file containing the output from bioinformatics software with a "blast-like" format into an XML format.

Class Pdb2XML