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Class IndexFastaDB

java.lang.Object

search.IndexFastaDB

public class IndexFastaDB
extends Object

IndexFastaDB will perform Biojava indexing of DNA or protein Fasta format files, creating an IndexedSequenceDB-compliant database. Setting the database name is optional; if not set, it defaults to being the same as the first file indexed. The index and store files are given the database name with the extension '.index' and '.store' respectively.

Since:

1.1

Version:

1.0

Author:

Keith James

Constructor Summary

Constructors

Constructor and Description
IndexFastaDB()

Method Summary

Methods

Modifier and Type	Method and Description
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IndexFastaDB

public IndexFastaDB()

Method Detail

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception